Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL44195.1 | SCL52198.1 | GA0070604_0253 | GA0070604_2507 | Signal transduction histidine kinase. | Adenylate cyclase, class 3. | 0.989 |
SCL44195.1 | SCL61563.1 | GA0070604_0253 | GA0070604_4543 | Signal transduction histidine kinase. | Glutamate synthase (NADH) large subunit. | 0.881 |
SCL44195.1 | SCL62036.1 | GA0070604_0253 | GA0070604_4648 | Signal transduction histidine kinase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.898 |
SCL44195.1 | SCL67588.1 | GA0070604_0253 | GA0070604_6036 | Signal transduction histidine kinase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.898 |
SCL44195.1 | SCL67613.1 | GA0070604_0253 | GA0070604_6043 | Signal transduction histidine kinase. | AAA ATPase domain-containing protein. | 0.990 |
SCL44195.1 | rpoB | GA0070604_0253 | GA0070604_5663 | Signal transduction histidine kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.547 |
SCL52198.1 | SCL44195.1 | GA0070604_2507 | GA0070604_0253 | Adenylate cyclase, class 3. | Signal transduction histidine kinase. | 0.989 |
SCL52198.1 | SCL62036.1 | GA0070604_2507 | GA0070604_4648 | Adenylate cyclase, class 3. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.815 |
SCL52198.1 | SCL67588.1 | GA0070604_2507 | GA0070604_6036 | Adenylate cyclase, class 3. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.733 |
SCL52198.1 | SCL67613.1 | GA0070604_2507 | GA0070604_6043 | Adenylate cyclase, class 3. | AAA ATPase domain-containing protein. | 0.704 |
SCL53513.1 | SCL61563.1 | GA0070604_2794 | GA0070604_4543 | 6-pyruvoyl-tetrahydropterin synthase. | Glutamate synthase (NADH) large subunit. | 0.608 |
SCL53513.1 | SCL62036.1 | GA0070604_2794 | GA0070604_4648 | 6-pyruvoyl-tetrahydropterin synthase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.842 |
SCL53513.1 | SCL67588.1 | GA0070604_2794 | GA0070604_6036 | 6-pyruvoyl-tetrahydropterin synthase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.842 |
SCL61563.1 | SCL44195.1 | GA0070604_4543 | GA0070604_0253 | Glutamate synthase (NADH) large subunit. | Signal transduction histidine kinase. | 0.881 |
SCL61563.1 | SCL53513.1 | GA0070604_4543 | GA0070604_2794 | Glutamate synthase (NADH) large subunit. | 6-pyruvoyl-tetrahydropterin synthase. | 0.608 |
SCL61563.1 | SCL62036.1 | GA0070604_4543 | GA0070604_4648 | Glutamate synthase (NADH) large subunit. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.921 |
SCL61563.1 | SCL67588.1 | GA0070604_4543 | GA0070604_6036 | Glutamate synthase (NADH) large subunit. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.921 |
SCL61563.1 | rpoA | GA0070604_4543 | GA0070604_5623 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.529 |
SCL61563.1 | rpoB | GA0070604_4543 | GA0070604_5663 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.710 |
SCL61563.1 | rpoC | GA0070604_4543 | GA0070604_5662 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.741 |
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