STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL63181.1Serine/threonine protein kinase. (1358 aa)    
Predicted Functional Partners:
SCL63162.1
Type I restriction enzyme M protein.
 
     0.946
SCL63176.1
Type I restriction enzyme, S subunit.
 
     0.946
SCL63187.1
AAA-like domain-containing protein.
 
     0.946
SCL63166.1
Predicted ATPase.
 
     0.935
SCL55628.1
FHA domain-containing protein.
  
 
 
 0.908
SCL63171.1
Hypothetical protein.
       0.773
SCL63184.1
Hypothetical protein.
       0.773
SCL44195.1
Signal transduction histidine kinase.
  
 0.661
SCL44160.1
Protein phosphatase.
 
 
 0.605
SCL49026.1
Protein phosphatase.
 
 
 0.593
Your Current Organism:
Micromonospora eburnea
NCBI taxonomy Id: 227316
Other names: DSM 44814, JCM 12345, M. eburnea, Micromonospora eburnea Thawai et al. 2005, Micromonospora sp. LK2-10, Micromonospora sp. LK2-5, Micromonospora sp. LK210, NBRC 101912, PCU 238, PCU:238, strain LK2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.