STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANIA_10349PWI domain mRNA processing protein, putative (AFU_orthologue AFUA_3G08120). (472 aa)    
Predicted Functional Partners:
ANIA_00505
Nonsense-mediated mRNA decay protein Upf3, putative (AFU_orthologue AFUA_6G11460).
    
 0.994
ANIA_05196
mRNA splicing factor (Prp17), putative (AFU_orthologue AFUA_6G07300).
    
 0.978
cyp1
Peptidyl-prolyl cis-trans isomerase-like 1; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity); Belongs to the cyclophilin-type PPIase family. PPIL1 subfamily.
    
 0.977
cwc22
Pre-mRNA-splicing factor cwc22; Involved in pre-mRNA splicing.
    
 0.977
ANIA_01350
Uncharacterized protein.
     
 0.962
ANIA_06695
Nonsense-mediated mRNA decay factor (Upf2), putative (AFU_orthologue AFUA_7G05430).
    
 
 0.961
ANIA_06586
RNA binding protein, putative (AFU_orthologue AFUA_6G04320).
   
 0.961
slu7
Pre-mRNA-splicing factor slu7; Involved in pre-mRNA splicing.
     
 0.958
ANIA_04499
Nuclear pore complex protein An-Nsp1 (Eurofung).
   
 
 0.952
syf2
Pre-mRNA-splicing factor syf2; Involved in pre-mRNA splicing.
     
 0.952
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.