STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANIA_10003GTP binding protein (GTPBP1), putative (AFU_orthologue AFUA_5G12580). (622 aa)    
Predicted Functional Partners:
ANIA_09108
Indoleamine 2,3-dioxygenase family protein (AFU_orthologue AFUA_7G02010).
 
      0.600
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
 
      0.477
ANIA_03605
FAD-binding FR-type domain-containing protein.
      
 0.473
ANIA_03865
Methionyl-tRNA synthetase, putative (AFU_orthologue AFUA_4G07820); Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.463
ANIA_01380
Methionyl-tRNA synthetase (AFU_orthologue AFUA_1G09010); Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.461
ANIA_04470
Tr-type G domain-containing protein.
    
 
 0.457
nudC
Nuclear movement protein nudC; Required for nuclear movement. May interact between microtubules and nuclei and/or may be involved in the generation of force used to move nuclei during interphase; Belongs to the nudC family.
      
 0.431
ANIA_02119
SSD domain-containing protein.
   
  
 0.429
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.