STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apdDFAD-dependent monooxygenase apdD; FAD-dependent monooxygenase; part of the gene cluster that mediates the biosynthesis of aspyridones. The polyketide-amino acid backbone preaspyridone A is first assembled by the PKS-NRPS hybrid apdA. The assembly of preaspyridone A is initiated by loading of malonyl-CoA onto apdA, followed by decarboxylation to yield the acetyl starter unit. The growing polyketide chain then elongates into a tetraketide. The adpA PKS module catalyzes three Claisen condensations, as well as beta-keto processing and methylation. Alpha-methylation step during polyketide s [...] (624 aa)    
Predicted Functional Partners:
apdG
Acyl-CoA dehydrogenase apdG; Acyl-CoA dehydrogenase; part of the gene cluster that mediates the biosynthesis of aspyridones. The polyketide-amino acid backbone preaspyridone A is first assembled by the PKS-NRPS hybrid apdA. The assembly of preaspyridone A is initiated by loading of malonyl-CoA onto apdA, followed by decarboxylation to yield the acetyl starter unit. The growing polyketide chain then elongates into a tetraketide. The adpA PKS module catalyzes three Claisen condensations, as well as beta-keto processing and methylation. Alpha-methylation step during polyketide synthesis i [...]
    
 0.630
apdB
Cytochrome P450 monooxygenase apdB; Cytochrome P450 monooxygenase; part of the gene cluster that mediates the biosynthesis of aspyridones. The polyketide-amino acid backbone preaspyridone A is first assembled by the PKS-NRPS hybrid apdA. The assembly of preaspyridone A is initiated by loading of malonyl-CoA onto apdA, followed by decarboxylation to yield the acetyl starter unit. The growing polyketide chain then elongates into a tetraketide. The adpA PKS module catalyzes three Claisen condensations, as well as beta-keto processing and methylation. Alpha-methylation step during polyketi [...]
   
 
 0.626
apdC
Trans-enoyl reductase apdC; Trans-enoyl reductase; part of the gene cluster that mediates the biosynthesis of aspyridones (Ref.5). The polyketide-amino acid backbone preaspyridone A is first assembled by the PKS-NRPS hybrid apdA. The assembly of preaspyridone A is initiated by loading of malonyl-CoA onto apdA, followed by decarboxylation to yield the acetyl starter unit. The growing polyketide chain then elongates into a tetraketide. The adpA PKS module catalyzes three Claisen condensations, as well as beta-keto processing and methylation. Alpha- methylation step during polyketide synt [...]
   
  
 0.605
aptA
Non-reducing polyketide synthase aptA; Non-reducing polyketide synthase (NRPKS); part of the gene cluster that mediates the biosynthesis of asperthecin, an anthraquinone pigment. Catalyzes the formation of the aromatic polyketide from acetyl coenzyme A and seven malonyl coenzyme A molecules. Through its product template (PT) domain, catalyzes the cyclization of the polyketide backbone via C6-C11 aldolcondensation. Polyketide is subsequently hydrolyzed from the NRPKS by the action of the hydrolase aptB into endocrocin-9-anthrone. Endocrocin-9-anthrone is then oxidized into endocrocin by [...]
      
 0.603
ANIA_04208
O-acyltransferase.
      
 0.481
ANIA_06159
O-acyltransferase.
      
 0.481
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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