STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bxlBExo-1,4-beta-xylosidase bxlB; Xylan 1,4-beta-xylosidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Active against rye arabinoxylan and xylohexaose, but not paranitrophenyl-beta-xyloside. (763 aa)    
Predicted Functional Partners:
xlnD
Exo-1,4-beta-xylosidase xlnD; Xylan 1,4-beta-xylosidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose.
  
  
0.906
ANIA_07864
GH43_C2 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.
   
 0.904
pgaX-1
Exopolygalacturonase X-1; Specific in hydrolyzing the terminal glycosidic bond of polygalacturonic acid and oligogalacturonates. Belongs to the glycosyl hydrolase 28 family.
   
 0.847
pgxB
Probable exopolygalacturonase B; Specific in hydrolyzing the terminal glycosidic bond of polygalacturonic acid and oligogalacturonates.
    
 0.840
AN8327
Endopolygalacturonase AN8327; Involved in maceration and soft-rotting of plant tissue. Hydrolyzes the 1,4-alpha glycosidic bonds of de-esterified pectate in the smooth region of the plant cell wall. Belongs to the glycosyl hydrolase 28 family.
   
 0.807
pgaX-2
Exopolygalacturonase X-2; Specific in hydrolyzing the terminal glycosidic bond of polygalacturonic acid and oligogalacturonates.
   
 0.806
pgaB
Endopolygalacturonase B; Involved in maceration and soft-rotting of plant tissue. Hydrolyzes the 1,4-alpha glycosidic bonds of de-esterified pectate in the smooth region of the plant cell wall. Belongs to the glycosyl hydrolase 28 family.
    
 0.806
pgaD
Probable endopolygalacturonase D; Involved in maceration and soft-rotting of plant tissue. Hydrolyzes the 1,4-alpha glycosidic bonds of de-esterified pectate in the smooth region of the plant cell wall (By similarity).
   
  0.801
ANIA_02860
Oxidoreductase, zinc-binding (AFU_orthologue AFUA_3G11900).
     
  0.800
ANIA_02858
NAD binding Rossmann fold oxidoreductase, putative (AFU_orthologue AFUA_3G11930).
     
  0.800
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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