STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANIA_07005Conserved leucine-rich repeat protein (AFU_orthologue AFUA_4G04440). (972 aa)    
Predicted Functional Partners:
ANIA_01802
Small nuclear ribonucleoprotein Sm D2.
    
 0.635
ANIA_09132
Uncharacterized protein.
    
 0.626
ANIA_06735
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.613
ANIA_02105
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.598
ANIA_01495
Small nuclear ribonucleoprotein G.
    
  0.586
ANIA_05779
U1 small nuclear ribonucleoprotein A, putative (AFU_orthologue AFUA_6G06490).
    
 0.536
ANIA_00109
U1 small nuclear ribonucleoprotein, putative (AFU_orthologue AFUA_5G11930).
    
 0.536
ANIA_01025
Uncharacterized protein.
    
 0.533
ANIA_07290
Uncharacterized protein.
    
 0.530
syf1
Pre-mRNA-splicing factor syf1; Involved in pre-mRNA splicing and cell cycle progression.
    
 
 0.514
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.