STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANIA_05920VPS9 domain protein, putative (AFU_orthologue AFUA_2G10890). (698 aa)    
Predicted Functional Partners:
ANIA_01344
Translation regulator GCD7 (AFU_orthologue AFUA_1G09450); Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.946
ANIA_03678
Guanine nucleotide exchange factor Vps9, putative (AFU_orthologue AFUA_4G12490).
    
 
0.790
ANIA_04915
RAB GTPase Vps21/Ypt51, putative (AFU_orthologue AFUA_3G10740).
    
 0.690
ANIA_03842
RAB GTPase Ypt5, putative (AFU_orthologue AFUA_4G08040).
    
 0.690
ANIA_02474
Ras-like GTP-binding protein, putative (AFU_orthologue AFUA_4G03100).
    
 0.671
ANIA_01341
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.637
ANIA_04951
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.494
ANIA_05895
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.454
ANIA_02000
Polyubiquitin.
    
  0.441
ANIA_00677
AN1-type domain-containing protein.
    
  0.441
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.