ANIA_04670 protein (Aspergillus nidulans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANIA_04670

Transcription factor (SPT8), putative (AFU_orthologue AFUA_5G09080). (643 aa)

Predicted Functional Partners:

ANIA_04894

0.992

ANIA_10953

0.977

ANIA_08232

0.974

ANIA_10763

0.960

ANIA_02769

0.956

ANIA_00719

0.956

ANIA_00440

0.950

ANIA_00794

0.947

ANIA_00154

0.947

ANIA_03621

0.945

Your Current Organism:

Aspergillus nidulans

NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANIA_00154	ANIA_00440	Q5BH26	Q5BG90	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	0.997
ANIA_00154	ANIA_00719	Q5BH26	Q5BFG1	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	SAGA-like transcriptional regulatory complex subunit Spt3, putative (AFU_orthologue AFUA_1G14030).	0.998
ANIA_00154	ANIA_00794	Q5BH26	Q5BF86	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcription initiation factor TFIID, 31kD subunit, putative (AFU_orthologue AFUA_1G14600).	0.999
ANIA_00154	ANIA_02769	Q5BH26	Q5B9L1	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcription initiation factor TFIID subunit 12, putative (AFU_orthologue AFUA_3G06090).	0.999
ANIA_00154	ANIA_03621	Q5BH26	C8V454	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Histone acetyltransferase (Gcn5), putative (AFU_orthologue AFUA_4G12650).	0.987
ANIA_00154	ANIA_04670	Q5BH26	Q5B460	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcription factor (SPT8), putative (AFU_orthologue AFUA_5G09080).	0.947
ANIA_00154	ANIA_04894	Q5BH26	Q5B3I6	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcriptional activator spt7 (AFU_orthologue AFUA_3G11000).	0.998
ANIA_00154	ANIA_08232	Q5BH26	Q5ATZ8	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcription initiation factor TFIID complex 60 kDa subunit (AFU_orthologue AFUA_5G03680).	0.999
ANIA_00154	ANIA_10763	Q5BH26	C8V3C2	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.997
ANIA_00154	ANIA_10953	Q5BH26	C8VBC1	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	Transcriptional co-activator (Hfi1/Ada1), putative (AFU_orthologue AFUA_2G06060).	0.996
ANIA_00440	ANIA_00154	Q5BG90	Q5BH26	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.997
ANIA_00440	ANIA_00719	Q5BG90	Q5BFG1	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	SAGA-like transcriptional regulatory complex subunit Spt3, putative (AFU_orthologue AFUA_1G14030).	0.998
ANIA_00440	ANIA_00794	Q5BG90	Q5BF86	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcription initiation factor TFIID, 31kD subunit, putative (AFU_orthologue AFUA_1G14600).	0.999
ANIA_00440	ANIA_02769	Q5BG90	Q5B9L1	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcription initiation factor TFIID subunit 12, putative (AFU_orthologue AFUA_3G06090).	0.995
ANIA_00440	ANIA_03621	Q5BG90	C8V454	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Histone acetyltransferase (Gcn5), putative (AFU_orthologue AFUA_4G12650).	0.969
ANIA_00440	ANIA_04670	Q5BG90	Q5B460	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcription factor (SPT8), putative (AFU_orthologue AFUA_5G09080).	0.950
ANIA_00440	ANIA_04894	Q5BG90	Q5B3I6	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcriptional activator spt7 (AFU_orthologue AFUA_3G11000).	0.998
ANIA_00440	ANIA_08232	Q5BG90	Q5ATZ8	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcription initiation factor TFIID complex 60 kDa subunit (AFU_orthologue AFUA_5G03680).	0.998
ANIA_00440	ANIA_10763	Q5BG90	C8V3C2	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.999
ANIA_00440	ANIA_10953	Q5BG90	C8VBC1	Transcriptional regulator Ngg1, putative (AFU_orthologue AFUA_1G04590).	Transcriptional co-activator (Hfi1/Ada1), putative (AFU_orthologue AFUA_2G06060).	0.995