STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANIA_02631Alpha-L-rhamnosidase C, putative (AFU_orthologue AFUA_3G02880). (568 aa)    
Predicted Functional Partners:
ANIA_05899
Chromosome segregation protein sudA.
   
 0.985
ANIA_04597
Chromosome segregation protein sudA.
   
 0.984
ANIA_04265
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.983
ANIA_08056
Hypothetical nuclear condensin complex subunit 3 (Eurofung).
   
 0.975
sudA
Chromosome segregation protein sudA; Involved in chromosome segregation in mitosis; Belongs to the SMC family. SMC3 subfamily.
   
 0.809
ANIA_02963
Chromosome segregation protein sudA.
   
 0.808
ANIA_08742
Structural maintenance of chromosome complex subunit SmcA (AFU_orthologue AFUA_6G02700).
   
 0.766
ANIA_10415
DNA repair protein Rad18, putative (AFU_orthologue AFUA_3G05440).
   
 0.718
bimC
Kinesin-like protein bimC; Important role in mitotic dividing cells. Microtubule motor required for spindle body separation; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. BimC subfamily.
   
  
 0.587
ANIA_10755
DNA polymerase.
   
  
 0.556
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.