STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANIA_00917RNA splicing factor (Pad-1), putative (AFU_orthologue AFUA_1G15810). (552 aa)    
Predicted Functional Partners:
cef1
Pre-mRNA-splicing factor cef1; Involved in pre-mRNA splicing and cell cycle control.
   
 
 0.963
ANIA_06036
PWI domain-containing protein.
   
 0.862
ANIA_07836
Cysteine-rich secreted protein (AFU_orthologue AFUA_7G01060).
   
 0.861
ANIA_06681
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.801
ANIA_02420
Splicing factor 3B subunit 1, putative (AFU_orthologue AFUA_2G13780).
   
 
 0.767
ANIA_01776
U1 snRNP splicing complex subunit (Luc7), putative (AFU_orthologue AFUA_6G09010).
   
 0.747
ANIA_00596
Damaged DNA binding protein (Eurofung).
    
 
 0.743
ANIA_10349
PWI domain mRNA processing protein, putative (AFU_orthologue AFUA_3G08120).
   
 0.737
ANIA_04850
G-patch domain protein, putative (AFU_orthologue AFUA_3G07480).
   
 0.715
ANIA_04936
Casein kinase, putative (AFU_orthologue AFUA_8G04810).
   
 0.706
Your Current Organism:
Aspergillus nidulans
NCBI taxonomy Id: 227321
Other names: A. nidulans FGSC A4, Aspergillus nidulans FGSC A4, Emericella nidulans FGSC A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.