Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBU_0106 | metN | CBU_0106 | CBU_0107 | Hypothetical protein. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.404 |
| CBU_0108 | CBU_0109 | CBU_0108 | CBU_0109 | Methionine transport system permease protein. | Methionine-binding protein; Belongs to the nlpA lipoprotein family. | 0.999 |
| CBU_0108 | metF | CBU_0108 | CBU_2047 | Methionine transport system permease protein. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.450 |
| CBU_0108 | metN | CBU_0108 | CBU_0107 | Methionine transport system permease protein. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| CBU_0109 | CBU_0108 | CBU_0109 | CBU_0108 | Methionine-binding protein; Belongs to the nlpA lipoprotein family. | Methionine transport system permease protein. | 0.999 |
| CBU_0109 | metN | CBU_0109 | CBU_0107 | Methionine-binding protein; Belongs to the nlpA lipoprotein family. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| CBU_0746 | metN | CBU_0746 | CBU_0107 | LPS ABC transporter ATP-binding protein. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.555 |
| CBU_1808 | metN | CBU_1808 | CBU_0107 | Export ABC transporter permease protein. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.899 |
| aspB | metN | CBU_0517 | CBU_0107 | Succinyldiaminopimelate aminotransferase. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.426 |
| metF | CBU_0108 | CBU_2047 | CBU_0108 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methionine transport system permease protein. | 0.450 |
| metF | metK | CBU_2047 | CBU_2030 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.752 |
| metF | metN | CBU_2047 | CBU_0107 | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.630 |
| metK | metF | CBU_2030 | CBU_2047 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.752 |
| metK | metN | CBU_2030 | CBU_0107 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.533 |
| metN | CBU_0106 | CBU_0107 | CBU_0106 | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Hypothetical protein. | 0.404 |
| metN | CBU_0108 | CBU_0107 | CBU_0108 | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Methionine transport system permease protein. | 0.999 |
| metN | CBU_0109 | CBU_0107 | CBU_0109 | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Methionine-binding protein; Belongs to the nlpA lipoprotein family. | 0.999 |
| metN | CBU_0746 | CBU_0107 | CBU_0746 | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | LPS ABC transporter ATP-binding protein. | 0.555 |
| metN | CBU_1808 | CBU_0107 | CBU_1808 | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Export ABC transporter permease protein. | 0.899 |
| metN | aspB | CBU_0107 | CBU_0517 | Methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Succinyldiaminopimelate aminotransferase. | 0.426 |
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