Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBU_0166Hypothetical protein. (254 aa)    
Predicted Functional Partners:
CBU_0788
Polyketide synthase.
  
 0.993
CBU_1928
acyl-CoA synthetase.
 
  
 0.967
CBU_0221
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 
 0.964
CBU_0324
acyl-CoA synthetase.
 
  
 0.901
CBU_0787
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.889
CBU_0168
Acyl carrier protein.
  
  
 0.781
CBU_0165
Hypothetical protein.
       0.768
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
    0.748
pksH
enoyl-CoA hydratase.
 
   
 0.707
CBU_0807
Beta-lactamase family protein.
 
  
 0.671
Your Current Organism:
Coxiella burnetii
NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493
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