Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0019 | CBU_0072 | CBU_0019 | CBU_0072 | Hypothetical protein. | Ankyrin repeat protein. | 0.785 |
CBU_0019 | CBU_0877 | CBU_0019 | CBU_0877 | Hypothetical protein. | Hypothetical protein. | 0.784 |
CBU_0019 | CBU_0880 | CBU_0019 | CBU_0880 | Hypothetical protein. | Hypothetical cytosolic protein. | 0.785 |
CBU_0019 | CBU_1076 | CBU_0019 | CBU_1076 | Hypothetical protein. | Transposase. | 0.431 |
CBU_0019 | CBU_1112 | CBU_0019 | CBU_1112 | Hypothetical protein. | Hypothetical protein with endo/excinuclease domain. | 0.782 |
CBU_0019 | xapA | CBU_0019 | CBU_0016 | Hypothetical protein. | Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.569 |
CBU_0072 | CBU_0019 | CBU_0072 | CBU_0019 | Ankyrin repeat protein. | Hypothetical protein. | 0.785 |
CBU_0072 | CBU_0877 | CBU_0072 | CBU_0877 | Ankyrin repeat protein. | Hypothetical protein. | 0.785 |
CBU_0072 | CBU_0880 | CBU_0072 | CBU_0880 | Ankyrin repeat protein. | Hypothetical cytosolic protein. | 0.785 |
CBU_0072 | CBU_1076 | CBU_0072 | CBU_1076 | Ankyrin repeat protein. | Transposase. | 0.430 |
CBU_0072 | CBU_1112 | CBU_0072 | CBU_1112 | Ankyrin repeat protein. | Hypothetical protein with endo/excinuclease domain. | 0.784 |
CBU_0072 | xapA | CBU_0072 | CBU_0016 | Ankyrin repeat protein. | Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.564 |
CBU_0877 | CBU_0019 | CBU_0877 | CBU_0019 | Hypothetical protein. | Hypothetical protein. | 0.784 |
CBU_0877 | CBU_0072 | CBU_0877 | CBU_0072 | Hypothetical protein. | Ankyrin repeat protein. | 0.785 |
CBU_0877 | CBU_0880 | CBU_0877 | CBU_0880 | Hypothetical protein. | Hypothetical cytosolic protein. | 0.785 |
CBU_0877 | CBU_1076 | CBU_0877 | CBU_1076 | Hypothetical protein. | Transposase. | 0.424 |
CBU_0877 | CBU_1112 | CBU_0877 | CBU_1112 | Hypothetical protein. | Hypothetical protein with endo/excinuclease domain. | 0.782 |
CBU_0877 | xapA | CBU_0877 | CBU_0016 | Hypothetical protein. | Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.552 |
CBU_0880 | CBU_0019 | CBU_0880 | CBU_0019 | Hypothetical cytosolic protein. | Hypothetical protein. | 0.785 |
CBU_0880 | CBU_0072 | CBU_0880 | CBU_0072 | Hypothetical cytosolic protein. | Ankyrin repeat protein. | 0.785 |
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