Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0788 | CBU_0962 | CBU_0788 | CBU_0962 | Polyketide synthase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.448 |
CBU_0788 | CBU_1514 | CBU_0788 | CBU_1514 | Polyketide synthase. | Hypothetical protein. | 0.675 |
CBU_0788 | CBU_1928 | CBU_0788 | CBU_1928 | Polyketide synthase. | acyl-CoA synthetase. | 0.996 |
CBU_0788 | ndk | CBU_0788 | CBU_1258 | Polyketide synthase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.515 |
CBU_0788 | polI | CBU_0788 | CBU_1795 | Polyketide synthase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.618 |
CBU_0962 | CBU_0788 | CBU_0962 | CBU_0788 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Polyketide synthase. | 0.448 |
CBU_0962 | CBU_0964 | CBU_0962 | CBU_0964 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.571 |
CBU_0962 | CBU_1514 | CBU_0962 | CBU_1514 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.637 |
CBU_0962 | CBU_1928 | CBU_0962 | CBU_1928 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | acyl-CoA synthetase. | 0.473 |
CBU_0962 | bcp | CBU_0962 | CBU_0963 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events. | 0.773 |
CBU_0962 | ndk | CBU_0962 | CBU_1258 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.712 |
CBU_0962 | polI | CBU_0962 | CBU_1795 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.432 |
CBU_0964 | CBU_0962 | CBU_0964 | CBU_0962 | Hypothetical protein. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.571 |
CBU_0964 | bcp | CBU_0964 | CBU_0963 | Hypothetical protein. | Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events. | 0.571 |
CBU_1514 | CBU_0788 | CBU_1514 | CBU_0788 | Hypothetical protein. | Polyketide synthase. | 0.675 |
CBU_1514 | CBU_0962 | CBU_1514 | CBU_0962 | Hypothetical protein. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.637 |
CBU_1514 | CBU_1928 | CBU_1514 | CBU_1928 | Hypothetical protein. | acyl-CoA synthetase. | 0.666 |
CBU_1514 | polI | CBU_1514 | CBU_1795 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.517 |
CBU_1928 | CBU_0788 | CBU_1928 | CBU_0788 | acyl-CoA synthetase. | Polyketide synthase. | 0.996 |
CBU_1928 | CBU_0962 | CBU_1928 | CBU_0962 | acyl-CoA synthetase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.473 |
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