STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBU_0976methylglutaconyl-CoA hydratase. (256 aa)    
Predicted Functional Partners:
leuA
hydroxymethylglutaryl-CoA lyase.
 
 0.995
CBU_0975
methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
 
 0.994
CBU_0977
methylcrotonyl-CoA carboxylase biotin-containing subunit.
 
 0.987
CBU_0973
isovaleryl-CoA dehydrogenase.
 
 0.947
CBU_0974
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.945
yfcX
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
0.942
CBU_0789
Two component system histidine kinase.
   
 0.829
CBU_1761
Two component system histidine kinase.
   
 0.829
CBU_0574
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.813
CBU_1084
Two component system histidine kinase.
   
 0.807
Your Current Organism:
Coxiella burnetii
NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493
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