rlmB protein (Coxiella burnetii) - STRING interaction network

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rlmB

23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. (270 aa)

Predicted Functional Partners:

rplK

0.896

rplM

0.787

rplC

0.779

rplO

0.752

rplQ

0.751

rplU

0.751

trmE

0.747

rsfS

0.742

rplX

0.737

rhlE

0.720

Your Current Organism:

Coxiella burnetii

NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rhlE	rlmB	CBU_0670	CBU_0986	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	0.720
rhlE	rplC	CBU_0670	CBU_0238	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.869
rhlE	rplK	CBU_0670	CBU_0226	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.789
rhlE	rplM	CBU_0670	CBU_1749	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.807
rhlE	rplO	CBU_0670	CBU_0257	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.722
rhlE	rplQ	CBU_0670	CBU_0264	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L17P.	0.691
rhlE	rplU	CBU_0670	CBU_0385	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.620
rhlE	rplX	CBU_0670	CBU_0249	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.807
rhlE	rsfS	CBU_0670	CBU_0552	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	Iojap protein family; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.653
rhlE	trmE	CBU_0670	CBU_1922	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.425
rlmB	rhlE	CBU_0986	CBU_0670	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	ATP-dependent RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	0.720
rlmB	rplC	CBU_0986	CBU_0238	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.779
rlmB	rplK	CBU_0986	CBU_0226	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.896
rlmB	rplM	CBU_0986	CBU_1749	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.787
rlmB	rplO	CBU_0986	CBU_0257	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.752
rlmB	rplQ	CBU_0986	CBU_0264	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L17P.	0.751
rlmB	rplU	CBU_0986	CBU_0385	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.751
rlmB	rplX	CBU_0986	CBU_0249	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.737
rlmB	rsfS	CBU_0986	CBU_0552	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	Iojap protein family; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.742
rlmB	trmE	CBU_0986	CBU_1922	23S rRNA Gm2251 methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.	tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.747

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