STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBU_1260OmpA-like transmembrane domain protein. (248 aa)    
Predicted Functional Partners:
icmE
IcmE.
  
   0.775
tolB
TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity; Belongs to the TolB family.
  
 
 0.672
CBU_0625
Hypothetical protein.
      
 0.659
CBU_0307
Outer membrane protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
 
 0.613
CBU_0936
OmpA-like transmembrane domain protein.
   
 
 0.574
CBU_1261
D-alanyl-D-alanine serine-type carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.534
CBU_1262
Hypothetical protein; Belongs to the UPF0250 family.
       0.528
CBU_0626
Hypothetical protein.
      
 0.512
CBU_1263
Hypothetical membrane associated protein.
       0.481
CBU_1412
Hypothetical exported protein.
   
 
 0.429
Your Current Organism:
Coxiella burnetii
NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.