Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_1354 | CBU_1355 | CBU_1354 | CBU_1355 | Hypothetical cytosolic protein. | HesB protein family; Belongs to the HesB/IscA family. | 0.796 |
CBU_1354 | CBU_1361 | CBU_1354 | CBU_1361 | Hypothetical cytosolic protein. | Rrf2 family protein. | 0.767 |
CBU_1354 | csdB | CBU_1354 | CBU_1357 | Hypothetical cytosolic protein. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.866 |
CBU_1354 | ftsH | CBU_1354 | CBU_1352 | Hypothetical cytosolic protein. | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.684 |
CBU_1354 | iscU.1 | CBU_1354 | CBU_1128 | Hypothetical cytosolic protein. | IscU. | 0.630 |
CBU_1354 | iscU.2 | CBU_1354 | CBU_1356 | Hypothetical cytosolic protein. | IscU. | 0.917 |
CBU_1354 | rrmJ | CBU_1354 | CBU_1353 | Hypothetical cytosolic protein. | 23S rRNA Um2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.714 |
CBU_1354 | sufB | CBU_1354 | CBU_1360 | Hypothetical cytosolic protein. | ABC transporter-associated protein. | 0.859 |
CBU_1354 | sufC | CBU_1354 | CBU_1359 | Hypothetical cytosolic protein. | ATP-dependent transporter. | 0.925 |
CBU_1354 | sufD | CBU_1354 | CBU_1358 | Hypothetical cytosolic protein. | SufD. | 0.899 |
CBU_1355 | CBU_1354 | CBU_1355 | CBU_1354 | HesB protein family; Belongs to the HesB/IscA family. | Hypothetical cytosolic protein. | 0.796 |
CBU_1355 | CBU_1361 | CBU_1355 | CBU_1361 | HesB protein family; Belongs to the HesB/IscA family. | Rrf2 family protein. | 0.905 |
CBU_1355 | csdB | CBU_1355 | CBU_1357 | HesB protein family; Belongs to the HesB/IscA family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.875 |
CBU_1355 | ftsH | CBU_1355 | CBU_1352 | HesB protein family; Belongs to the HesB/IscA family. | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.684 |
CBU_1355 | iscU.1 | CBU_1355 | CBU_1128 | HesB protein family; Belongs to the HesB/IscA family. | IscU. | 0.712 |
CBU_1355 | iscU.2 | CBU_1355 | CBU_1356 | HesB protein family; Belongs to the HesB/IscA family. | IscU. | 0.982 |
CBU_1355 | rrmJ | CBU_1355 | CBU_1353 | HesB protein family; Belongs to the HesB/IscA family. | 23S rRNA Um2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.764 |
CBU_1355 | sufB | CBU_1355 | CBU_1360 | HesB protein family; Belongs to the HesB/IscA family. | ABC transporter-associated protein. | 0.937 |
CBU_1355 | sufC | CBU_1355 | CBU_1359 | HesB protein family; Belongs to the HesB/IscA family. | ATP-dependent transporter. | 0.915 |
CBU_1355 | sufD | CBU_1355 | CBU_1358 | HesB protein family; Belongs to the HesB/IscA family. | SufD. | 0.898 |
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