STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shaFSodium/proton antiporter protein. (100 aa)    
Predicted Functional Partners:
shaA
Sodium/proton antiporter protein.
 
 
 0.999
shaG
Sodium/proton antiporter protein.
 
 
 0.998
shaE
Sodium/proton antiporter protein.
 
 
 0.998
shaD
Sodium/proton antiporter protein.
 
 
 0.998
CBU_1586
Hypothetical protein.
 
 
 0.998
shaB
Sodium/proton antiporter protein.
 
 
 0.990
nuoL
NADH-quinone oxidoreductase chain L.
  
 
 0.809
CBU_1589
Hypothetical membrane associated protein.
       0.504
nhaP.2
Na+/H+ antiporter.
     
 0.404
Your Current Organism:
Coxiella burnetii
NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.