STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBU_1600Heat resistant agglutinin. (181 aa)    
Predicted Functional Partners:
CBU_1412
Hypothetical exported protein.
      
 0.589
CBU_1414
Hypothetical exported protein.
      
 0.589
ompH
Outer membrane protein.
  
 
   0.534
lolB
Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
  
 0.526
CBU_0197
Hypothetical outer membrane protein.
      
 0.497
CBU_0736
Hypothetical exported protein.
      
 0.497
icmE
IcmE.
  
   
 0.497
CBU_1095
Hypothetical exported protein.
      
 0.496
CBU_2079
Hypothetical protein.
      
 0.496
CBU_1413
Hypothetical exported membrane spanning protein.
      
 0.494
Your Current Organism:
Coxiella burnetii
NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.