STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUH34107.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)    
Predicted Functional Partners:
KUH34105.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
KUH34106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KUH34108.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KUH34109.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KUH34110.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KUH34111.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.501
KUH34104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.473
KUH34103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.429
KUH34112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.407
KUH34113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.407
Your Current Organism:
Thermococcus celericrescens
NCBI taxonomy Id: 227598
Other names: DSM 17994, JCM 13640, NBRC 101555, T. celericrescens, Thermococcus celericrescens Kuwabara et al. 2007, Thermococcus sp. TS2, strain TS2
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