STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCA_00254Conserved hypothetical protein; Similar to GP:7189191; identified by sequence similarity; putative. (292 aa)    
Predicted Functional Partners:
CCA_00256
Conserved hypothetical protein; Similar to GB:X57326, and PID:48151; identified by sequence similarity; putative.
  
   0.827
CCA_00255
HIT family protein; Identified by match to PFAM protein family HMM PF04126.
  
    0.826
CCA_00253
Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF02404.
 
     0.813
CCA_00969
Succinate dehydrogenase, cytochrome b558 subunit, putative; Similar to GB:X56071, PID:507063, and SP:P51603; identified by sequence similarity; putative.
   
    0.593
CCA_00232
Conserved hypothetical protein; Similar to GB:L17309, SP:P39064, PID:348049, PID:2293223, and GB:AL009126; identified by sequence similarity; putative.
  
     0.543
CCA_00668
Conserved hypothetical protein; Similar to GB:L04979, SP:P28307, PID:290425, PID:1147564, GB:U00096, PID:1651511, PID:1651514, and PID:1787279; identified by sequence similarity; putative.
  
     0.499
CCA_00993
Conserved hypothetical protein; Similar to GB:L12145, SP:Q08633, PID:470687, and PID:558154; identified by sequence similarity; putative.
  
     0.413
Your Current Organism:
Chlamydia caviae
NCBI taxonomy Id: 227941
Other names: C. caviae GPIC, Chlamydia caviae GPIC, Chlamydophila caviae GPIC, Chlamydophila caviae str. GPIC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.