STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCA_00321Conserved hypothetical protein; Similar to GP:7190660; identified by sequence similarity; putative. (213 aa)    
Predicted Functional Partners:
CCA_00084
Conserved hypothetical protein TIGR00150; Similar to GB:M34239, SP:P33119, GB:M80338, PID:144973, PID:144977, GB:M34239, SP:P33119, GB:M80338, PID:144973, and PID:144977; identified by sequence similarity; putative.
  
 
 0.942
gcp_2
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.916
CCA_00489
Conserved hypothetical protein; Similar to GB:X69957, SP:P43148, and PID:396259; identified by sequence similarity; putative.
 
    0.770
CCA_00926
Conserved hypothetical protein; Similar to GB:M88334, SP:P25526, PID:147901, GB:U00096, and PID:1789015; identified by sequence similarity; putative.
  
     0.762
CCA_00205
Polymorphic outer membrane protein B/C family protein/autotransporter, putative; Identified by match to PFAM protein family HMM PF02415.
  
     0.761
CCA_00206
Polymorphic outer membrane protein A family protein/autotransporter, putative; Similar to GP:8978910; identified by sequence similarity; putative.
  
     0.761
CCA_00313
Conserved hypothetical protein; Similar to GB:X75568; identified by sequence similarity; putative.
 
     0.756
CCA_00284
Polymorphic outer membrane protein G family protein/autotransporter; Similar to GB:S70840, PID:546752, GB:L09228, SP:P17616, GB:X51510, PID:40084, PID:410123, and GB:AL009126; identified by sequence similarity; putative.
  
     0.751
CCA_00765
YjgP/YjgQ family protein; Similar to SP:P13979, GB:X52553, SP:P15177, SP:P32885, and GB:J01769; identified by sequence similarity; putative.
  
     0.748
sctQ
Type III secretion translocase SctQ; Identified by match to PFAM protein family HMM PF01052.
  
     0.738
Your Current Organism:
Chlamydia caviae
NCBI taxonomy Id: 227941
Other names: C. caviae GPIC, Chlamydia caviae GPIC, Chlamydophila caviae GPIC, Chlamydophila caviae str. GPIC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.