Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCA_00549Methyltransferase, putative; Similar to GP:5139640, GB:M14777, GB:S76221, GB:S76223, GB:S76225, GB:S76228, GB:S76232, GB:S76235, GB:S49975, GB:M21866, GB:M21758, GB:M15872, GB:M25627, GB:S76219, SP:P08263, SP:P09210, PID:187132, PID:306809, PID:306810, PID:306815, PID:825605, and PID:951352; identified by sequence similarity; putative. (270 aa)    
Predicted Functional Partners:
CCA_00547
Conserved hypothetical protein; Similar to GP:7189490, and GP:7189490; identified by sequence similarity; putative.
       0.647
CCA_00548
Ribonuclease BN family protein; Similar to GB:M63957, SP:P30720, PID:151242, PID:999193, GB:M63957, SP:P30720, PID:151242, and PID:999193; identified by sequence similarity; putative.
       0.647
incA
Inclusion membrane protein A; Chlamydia replicate within a host intracellular vacuole, termed an inclusion, which is formed by fusion of many smaller inclusion bodies. IncA is probably involved in the homotypic fusion of inclusions; Belongs to the IncA family.
       0.567
ispA
Geranyltranstransferase; Similar to SP:O66126, and GB:X72832; identified by sequence similarity; putative; Belongs to the FPP/GGPP synthase family.
  
 
 0.561
CCA_00546
Conserved hypothetical protein; Similar to GB:L17309, SP:P39064, PID:348049, PID:2293223, GB:AL009126, GB:L17309, SP:P39064, PID:348049, PID:2293223, and GB:AL009126; identified by sequence similarity; putative.
       0.498
CCA_00847
Aas bifunctional protein, putative; Similar to GP:7190194; identified by sequence similarity; putative.
     
 0.423
CCA_00848
Conserved hypothetical protein; Similar to SP:P00808, GB:X05798, GB:V00093, SP:P00808, GB:X05798, and GB:V00093; identified by sequence similarity; putative.
     
 0.423
Your Current Organism:
Chlamydia caviae
NCBI taxonomy Id: 227941
Other names: C. caviae GPIC, Chlamydia caviae GPIC, Chlamydophila caviae GPIC, Chlamydophila caviae str. GPIC
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