STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCA_008468-amino-7-oxononanoate synthase, putative; Similar to SP:P00808, GB:X05798, and GB:V00093; identified by sequence similarity; putative. (364 aa)    
Predicted Functional Partners:
CCA_00847
Aas bifunctional protein, putative; Similar to GP:7190194; identified by sequence similarity; putative.
  
 
 0.917
CCA_00848
Conserved hypothetical protein; Similar to SP:P00808, GB:X05798, GB:V00093, SP:P00808, GB:X05798, and GB:V00093; identified by sequence similarity; putative.
  
 
 0.910
CCA_00849
3'(2'),5'-biphosphate phosphatase nucleotidase; Similar to GP:8698799, SP:P00808, GB:X05798, and GB:V00093; identified by sequence similarity; putative.
   
   0.559
aroE
3-dehydroquinate dehydratase/shikimate 5-dehydrogenase; Similar to GB:M17642, SP:P11469, PID:142968, and GB:AL009126; identified by sequence similarity; putative.
       0.528
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.479
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.452
ribA/B
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.443
Your Current Organism:
Chlamydia caviae
NCBI taxonomy Id: 227941
Other names: C. caviae GPIC, Chlamydia caviae GPIC, Chlamydophila caviae GPIC, Chlamydophila caviae str. GPIC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.