STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNOK_0947400Ras-domain-containing. (223 aa)    
Predicted Functional Partners:
PNOK_0200900
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.951
PNOK_0062400
Rab-geranylgeranyltransferase.
    
 0.864
PNOK_0934100
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.852
PNOK_0321800
FAD NAD(P)-binding domain-containing.
   
 0.850
PNOK_0093500
GTP binding protein.
  
 
0.823
PNOK_0781200
Actin-like ATPase domain-containing; Belongs to the actin family.
   
 
 0.777
PNOK_0749700
Dynactin p62.
   
 
  0.770
PNOK_0889600
Trimeric.
     
 0.765
PNOK_0706500
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.754
PNOK_0064500
Ras-domain-containing.
  
0.717
Your Current Organism:
Pyrrhoderma noxium
NCBI taxonomy Id: 2282107
Other names: Fomes noxius, P. noxium, Phellinidium noxium, Phellinus noxius, Pyrrhoderma noxium (Corner) L.W. Zhou & Y.C. Dai, 2018
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