STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNOK_0153200Glycoside hydrolase family 78. (679 aa)    
Predicted Functional Partners:
PNOK_0222400
WD40 domain containing protein.
    
 0.697
PNOK_0015400
U3 snornp utp20.
   
  0.695
PNOK_0316300
Nop domain-containing.
    
  0.691
PNOK_0176300
WD40 domain containing protein.
    
 0.691
PNOK_0204600
WD40 domain containing protein.
   
  0.690
PNOK_0381200
WD40 domain containing protein.
   
  0.689
PNOK_0862900
U3 small nucleolar RNA-associated 10.
    
 0.676
PNOK_0239200
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.670
PNOK_0907000
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.668
PNOK_0752900
Nop-domain-containing.
    
  0.667
Your Current Organism:
Pyrrhoderma noxium
NCBI taxonomy Id: 2282107
Other names: Fomes noxius, P. noxium, Phellinidium noxium, Phellinus noxius, Pyrrhoderma noxium (Corner) L.W. Zhou & Y.C. Dai, 2018
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