Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_0008 | RMCC_0146 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
RMCC_0008 | RMCC_0987 | Uncharacterized protein. | Uncharacterized protein. | 0.690 |
RMCC_0008 | RMCC_1270 | Uncharacterized protein. | Hypothetical protein. | 0.648 |
RMCC_0008 | RMCC_2558 | Uncharacterized protein. | Lipoprotein peptidase LpqM. | 0.689 |
RMCC_0008 | RMCC_2583 | Uncharacterized protein. | LpqM. | 0.642 |
RMCC_0008 | RMCC_2997 | Uncharacterized protein. | Uncharacterized protein. | 0.625 |
RMCC_0008 | RMCC_4012 | Uncharacterized protein. | Predicted protein. | 0.669 |
RMCC_0008 | RMCC_4224 | Uncharacterized protein. | Uncharacterized protein. | 0.621 |
RMCC_0008 | RMCC_5114 | Uncharacterized protein. | Hypothetical protein. | 0.690 |
RMCC_0008 | RMCC_5344 | Uncharacterized protein. | DivIVA domain-containing protein. | 0.676 |
RMCC_0146 | RMCC_0008 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
RMCC_0146 | RMCC_0987 | Uncharacterized protein. | Uncharacterized protein. | 0.530 |
RMCC_0146 | RMCC_1270 | Uncharacterized protein. | Hypothetical protein. | 0.622 |
RMCC_0146 | RMCC_2997 | Uncharacterized protein. | Uncharacterized protein. | 0.694 |
RMCC_0146 | RMCC_5114 | Uncharacterized protein. | Hypothetical protein. | 0.544 |
RMCC_0146 | RMCC_5344 | Uncharacterized protein. | DivIVA domain-containing protein. | 0.709 |
RMCC_0987 | RMCC_0008 | Uncharacterized protein. | Uncharacterized protein. | 0.690 |
RMCC_0987 | RMCC_0146 | Uncharacterized protein. | Uncharacterized protein. | 0.530 |
RMCC_0987 | RMCC_1270 | Uncharacterized protein. | Hypothetical protein. | 0.759 |
RMCC_0987 | RMCC_2558 | Uncharacterized protein. | Lipoprotein peptidase LpqM. | 0.576 |
page 1 of 5