Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_0030 | RMCC_0032 | RMCC_0030 | RMCC_0032 | SAM-dependent methyltransferase. | Uncharacterized protein. | 0.711 |
RMCC_0030 | RMCC_0033 | RMCC_0030 | RMCC_0033 | SAM-dependent methyltransferase. | Short-chain dehydrogenase. | 0.792 |
RMCC_0030 | RMCC_0034 | RMCC_0030 | RMCC_0034 | SAM-dependent methyltransferase. | ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.602 |
RMCC_0030 | RMCC_0035 | RMCC_0030 | RMCC_0035 | SAM-dependent methyltransferase. | Alternative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.425 |
RMCC_0030 | RMCC_0036 | RMCC_0030 | RMCC_0036 | SAM-dependent methyltransferase. | Anti-sigma factor. | 0.425 |
RMCC_0030 | chrA | RMCC_0030 | RMCC_0031 | SAM-dependent methyltransferase. | Chromate transporter. | 0.746 |
RMCC_0032 | RMCC_0030 | RMCC_0032 | RMCC_0030 | Uncharacterized protein. | SAM-dependent methyltransferase. | 0.711 |
RMCC_0032 | RMCC_0033 | RMCC_0032 | RMCC_0033 | Uncharacterized protein. | Short-chain dehydrogenase. | 0.786 |
RMCC_0032 | RMCC_0034 | RMCC_0032 | RMCC_0034 | Uncharacterized protein. | ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.672 |
RMCC_0032 | RMCC_0035 | RMCC_0032 | RMCC_0035 | Uncharacterized protein. | Alternative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.456 |
RMCC_0032 | RMCC_0036 | RMCC_0032 | RMCC_0036 | Uncharacterized protein. | Anti-sigma factor. | 0.456 |
RMCC_0032 | chrA | RMCC_0032 | RMCC_0031 | Uncharacterized protein. | Chromate transporter. | 0.737 |
RMCC_0033 | RMCC_0030 | RMCC_0033 | RMCC_0030 | Short-chain dehydrogenase. | SAM-dependent methyltransferase. | 0.792 |
RMCC_0033 | RMCC_0032 | RMCC_0033 | RMCC_0032 | Short-chain dehydrogenase. | Uncharacterized protein. | 0.786 |
RMCC_0033 | RMCC_0034 | RMCC_0033 | RMCC_0034 | Short-chain dehydrogenase. | ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.823 |
RMCC_0033 | RMCC_0035 | RMCC_0033 | RMCC_0035 | Short-chain dehydrogenase. | Alternative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.497 |
RMCC_0033 | RMCC_0036 | RMCC_0033 | RMCC_0036 | Short-chain dehydrogenase. | Anti-sigma factor. | 0.729 |
RMCC_0033 | chrA | RMCC_0033 | RMCC_0031 | Short-chain dehydrogenase. | Chromate transporter. | 0.737 |
RMCC_0034 | RMCC_0030 | RMCC_0034 | RMCC_0030 | ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | SAM-dependent methyltransferase. | 0.602 |
RMCC_0034 | RMCC_0032 | RMCC_0034 | RMCC_0032 | ybaK/ebsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Uncharacterized protein. | 0.672 |
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