STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0037acetyl-CoA carboxylase biotin carboxyl carrier protein subunit. (71 aa)    
Predicted Functional Partners:
RMCC_5957
Biotin--protein ligase.
 
 
 0.932
RMCC_3883
Oxidoreductase subunit alpha.
     
 0.929
RMCC_4030
propionyl-CoA carboxylase beta subunit 6 accD6.
 
 0.928
RMCC_4760
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.927
RMCC_5980
Bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha subunit accA3: biotin carboxylase + biotin carboxyl carrier protein.
 
 
 0.914
glcB
Malate synthase G glcB; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.913
RMCC_3993
Acetyl-/propionyl-coenzyme A carboxylase subunit alpha.
   
 0.913
RMCC_2496
Fatty acid synthase.
    
 0.906
RMCC_3499
Type II citrate synthase; Belongs to the citrate synthase family.
  
 
 0.905
RMCC_3503
Citrate synthase 2; Belongs to the citrate synthase family.
  
 
 0.905
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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