STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0076Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
RMCC_0074
DsrE family protein.
 
     0.960
RMCC_0078
Radical SAM protein.
 
     0.958
RMCC_0079
Selenophosphate synthetase.
 
   
 0.958
RMCC_0077
Flavoprotein, K+ transport.
 
     0.952
RMCC_0075
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
 
  0.944
RMCC_0080
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
 
  0.939
RMCC_0081
Glycosyl transferase family protein.
 
   0.920
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.659
RMCC_1069
Hypothetical protein.
 
     0.640
RMCC_1072
Nitrilase.
 
 
  0.611
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.