STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0093ATP-binding protein ABC transporter. (445 aa)    
Predicted Functional Partners:
RMCC_0094
Hypothetical protein.
 
     0.781
RMCC_0284
Cyclase/dehydrase.
  
 
 
 0.738
RMCC_1307
Cyclase/dehydrase.
  
 
 
 0.717
RMCC_4649
XRE family transcriptional regulator.
  
     0.672
RMCC_0095
Hypothetical protein.
       0.661
RMCC_1300
Polyketide cyclase/dehydrase and lipid transport.
  
     0.634
RMCC_3844
Anion transporter ATPase.
  
     0.521
RMCC_3176
NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
  
  0.515
RMCC_0386
Methyltransferase type 11.
    
  0.512
RMCC_0394
Methyltransferase family protein.
    
  0.512
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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