STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0238Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
RMCC_3375
Dihydrodipicolinate reductase N-terminus domain-containing protein.
  
     0.706
RMCC_4364
NTF2 domain-containing protein.
  
     0.674
RMCC_6272
Tetr family transcriptional regulator.
  
     0.653
RMCC_1016
Phenyloxazoline synthase mbtB.
  
 
 0.646
RMCC_1485
Hypothetical protein.
  
     0.616
RMCC_1495
Hypothetical protein.
  
     0.614
RMCC_1490
TetR family transcriptional regulator.
  
     0.611
RMCC_1200
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.608
RMCC_0237
Conserved repeat domain protein.
    
  0.572
RMCC_1588
Putative delta(5)-3-ketosteroid isomerase.
  
     0.570
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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