STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0263Iron-sulfur cluster biosynthesis protein; Belongs to the HesB/IscA family. (118 aa)    
Predicted Functional Partners:
RMCC_2065
Cysteine desulfurase iscS.
 
 
 0.873
RMCC_1151
Nitrogen fixation-like protein.
 
  
 0.850
RMCC_1450
Glycine cleavage T protein; Belongs to the GcvT family.
 
 
 0.807
RMCC_0262
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.782
RMCC_1153
FeS assembly ATPase SufC.
  
 
 0.762
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.732
RMCC_5389
Alpha-ketoglutarate decarboxylase.
  
   
 0.696
RMCC_1154
FeS assembly protein SufD.
  
 
 0.678
RMCC_1155
FeS assembly protein SufB.
  
 
 0.678
RMCC_0072
Molybdopterin biosynthesis-like protein MoeZ.
 
  
 0.607
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.