Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCC_0331acyl-CoA thioesterase II. (287 aa)    
Predicted Functional Partners:
RMCC_5463
acyl-CoA thioesterase II tesB2.
  
  
 
0.860
pyk3
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.847
RMCC_3954
NAD-dependent glutamate dehydrogenase gdh.
   
    0.770
RMCC_1288
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.720
RMCC_0327
Protein of unknown function.
       0.653
gltB
Glutamate synthase (NADPH/NADH) large chain.
       0.531
RMCC_3966
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
 
  
 0.519
RMCC_4178
enoyl-CoA hydratase EchA3.
  
 
  0.512
RMCC_0329
Glutamate synthase NADH/NADPH small subunit.
  
    0.464
RMCC_0563
Hypothetical protein.
  
  
  0.459
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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