STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0331acyl-CoA thioesterase II. (287 aa)    
Predicted Functional Partners:
RMCC_5463
acyl-CoA thioesterase II tesB2.
  
  
 
0.884
pyk3
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.852
RMCC_3954
NAD-dependent glutamate dehydrogenase gdh.
   
    0.755
RMCC_1288
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.733
RMCC_0327
Protein of unknown function.
       0.664
gltB
Glutamate synthase (NADPH/NADH) large chain.
       0.559
RMCC_4178
enoyl-CoA hydratase EchA3.
  
 
  0.501
RMCC_0326
TM2 domain-containing protein.
       0.495
RMCC_0329
Glutamate synthase NADH/NADPH small subunit.
       0.463
pdxS
Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
  
  
 0.437
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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