STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0334Transmembrane ATP-binding protein ABC transporter cydD. (540 aa)    
Predicted Functional Partners:
cydC
Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC.
 
0.999
RMCC_0335
Integral membrane cytochrome D ubiquinol oxidase subunit II cydB.
 
  
 0.997
RMCC_0336
Integral membrane cytochrome D ubiquinol oxidase subunit I cydA.
 
  
 0.997
RMCC_0332
Putative uncharacterized protein.
       0.778
RMCC_0337
Conserved membrane protein.
       0.756
RMCC_1956
ABC transporter ATP-binding protein/permease.
 
 
0.668
RMCC_1019
ABC transporter ATPase/permease.
 
 
 
0.604
RMCC_1020
ABC transporter ATPase/permease.
 
 
 
0.600
RMCC_1955
ABC transporter.
 
 
 
0.586
RMCC_3623
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.582
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.