STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0337Conserved membrane protein. (172 aa)    
Predicted Functional Partners:
RMCC_0334
Transmembrane ATP-binding protein ABC transporter cydD.
       0.756
RMCC_0336
Integral membrane cytochrome D ubiquinol oxidase subunit I cydA.
  
    0.710
cydC
Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC.
       0.694
RMCC_5108
Mg2+ transporter-C (MgtC) family protein.
  
  
 0.668
RMCC_5384
MgtC-like protein.
  
  
 0.668
RMCC_4922
Uncharacterized protein.
  
     0.650
RMCC_0335
Integral membrane cytochrome D ubiquinol oxidase subunit II cydB.
  
    0.618
RMCC_6207
Glutamate decarboxylase gadB; Belongs to the group II decarboxylase family.
  
  
 0.613
RMCC_6115
ABC transporter, ATP-binding protein.
  
     0.588
RMCC_3872
Transmembrane ABC transporter ATP-binding protein.
  
     0.549
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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