STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0363Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
RMCC_0361
Lipolytic enzyme, G-D-S-L.
  
 0.777
RMCC_2541
Glycoside hydrolase family 10.
    
 0.674
RMCC_0869
Cellulase celA1; Belongs to the glycosyl hydrolase family 6.
  
 0.658
RMCC_2777
Lysophospholipase L1-like esterase.
   
 0.656
RMCC_3377
Hypothetical protein.
   
 0.656
RMCC_4238
Cutinase Cut4; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
   
 0.656
RMCC_4377
Lysophospholipase L1-like esterase.
   
 0.656
RMCC_4843
GDSL family lipase.
   
 0.656
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.627
RMCC_0362
Membrane acyltransferase.
       0.586
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.