STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0369Aldo/keto reductase. (349 aa)    
Predicted Functional Partners:
RMCC_2127
2,5-diketo-D-gluconic acid reductase A.
 
 0.743
RMCC_5501
Aldo/keto reductase.
  
     0.721
RMCC_2128
Oxidoreductase.
 
0.622
RMCC_1919
Glycerol uptake facilitator, MIP channel; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.551
RMCC_4019
Permease, glycerol uptake facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.551
RMCC_6234
Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.551
RMCC_6291
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.551
RMCC_0368
TetR family transcriptional regulator.
       0.544
RMCC_0760
Oxidoreductase YdbC.
  
     0.531
RMCC_3533
Iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.489
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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