Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
RMCC_0481Transposase. (402 aa)    
Predicted Functional Partners:
RMCC_2289
NAD dependent epimerasedehydratase family protein.
  
     0.642
RMCC_4952
Uncharacterized protein.
 
    0.533
RMCC_5780
Gp3.
  
   
 0.522
RMCC_4760
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.513
RMCC_3883
Oxidoreductase subunit alpha.
     
  0.457
RMCC_0482
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
       0.439
ssuB
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
       0.439
RMCC_0484
Putative uncharacterized protein.
       0.439
RMCC_1499
AsnC family transcriptional regulator.
  
     0.430
rpsH
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.
    
  0.414
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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