Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
RMCC_0484Putative uncharacterized protein. (348 aa)    
Predicted Functional Partners:
RMCC_0482
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.993
ssuB
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
 0.983
RMCC_4550
ABC transporter permease.
 
 0.971
RMCC_4551
ABC transporter ATP-binding protein.
 
 0.881
RMCC_3268
Sulfonate ABC transporter ATP-binding protein.
  
 0.823
RMCC_5266
ABC transporter.
  
 0.823
RMCC_5386
ABC transporter ATP-binding protein.
  
 0.823
RMCC_0917
Putative conserved integral membrane alanine and leucine rich protein.
  
 0.811
RMCC_2381
Integral membrane alanine and leucine rich protein.
  
 0.811
RMCC_3267
ABC transporter permease.
  
 0.811
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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