STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0592Uncharacterized protein. (286 aa)    
Predicted Functional Partners:
RMCC_0590
Uncharacterized protein.
 
    0.737
RMCC_0547
Universal stress protein UspA-like protein.
  
    0.730
RMCC_0559
Transmembrane protein.
  
  
 0.720
RMCC_0589
Crp/Fnr family transcriptional regulator.
 
    0.709
RMCC_0588
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
  
    0.686
RMCC_0563
Hypothetical protein.
  
    0.682
RMCC_0578
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.671
RMCC_0591
Uncharacterized protein.
       0.658
RMCC_0554
Uncharacterized protein.
   
  
 0.657
RMCC_0576
Hypothetical protein.
  
  
 0.623
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.