STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0647Urea amidolyase related protein. (293 aa)    
Predicted Functional Partners:
RMCC_0646
Allophanate hydrolase subunit 1.
 0.999
RMCC_0226
Urea amidolyase.
 
0.997
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.987
RMCC_0648
Aminoglycoside 2-N-acetyltransferase aac.
  
  
 0.915
RMCC_0227
Urea carboxylase-associated protein 1.
 
  
 0.909
RMCC_0228
Urea carboxylase.
 
  
 0.902
RMCC_5024
Delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.807
RMCC_3993
Acetyl-/propionyl-coenzyme A carboxylase subunit alpha.
 
 
  0.797
RMCC_3641
Membrane protein.
  
 
 0.789
RMCC_1252
Acetyl-/propionyl-coenzyme A carboxylase subunit alpha.
 
 
  0.780
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.