STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0721acyl-CoA dehydrogenase. (384 aa)    
Predicted Functional Partners:
RMCC_0719
acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.940
RMCC_0720
Carbamoyl-phosphate synthase subunit L.
  
 
 0.932
RMCC_2059
Electron transfer flavoprotein beta subunit fixA.
 
 0.893
RMCC_2060
Electron transfer flavoprotein alpha subunit fixB.
 0.889
RMCC_1251
acetyl-/propionyl-CoA carboxylase beta subunit accD2.
 
 
 0.859
RMCC_1254
enoyl-CoA hydratase.
  
 0.856
RMCC_1252
Acetyl-/propionyl-coenzyme A carboxylase subunit alpha.
  
 
 0.840
RMCC_1288
3-hydroxyacyl-CoA dehydrogenase.
  
 0.834
acd
acyl-CoA dehydrogenase.
 
   
0.827
RMCC_1551
enoyl-CoA hydratase.
   
 0.793
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.