STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0787Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
RMCC_4760
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.711
gltB
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.617
RMCC_6293
Ferredoxin-dependent glutamate synthase [NADPH] large subunit gltB.
   
 
 0.617
RMCC_3883
Oxidoreductase subunit alpha.
    
  0.614
RMCC_1010
lysine-N-oxygenase mbtG.
  
 
 0.576
RMCC_1952
L-ornithine 5-/L-lysine 6-monooxygenase.
  
 
 0.576
RMCC_3653
Putative peptide monooxygenase.
  
 
 0.576
RMCC_2968
Aminoglycoside phosphotransferase.
    
  0.510
RMCC_2988
Phosphotransferase enzyme family protein.
    
  0.510
RMCC_3165
Aminoglycoside phosphotransferase.
    
  0.510
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.