STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0798Glyoxalase/bleomycin resistance protein. (183 aa)    
Predicted Functional Partners:
RMCC_0799
Amidohydrolase 2.
    
  0.730
RMCC_1124
methylmalonyl-CoA mutase.
    
 0.653
RMCC_1125
methylmalonyl-CoA mutase small subunit mutA.
    
 0.653
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.641
RMCC_4043
Zn-dependent hydrolase, glyoxylase.
    
  0.610
RMCC_5714
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
  0.605
RMCC_3883
Oxidoreductase subunit alpha.
     
 0.573
RMCC_0797
TetR-family transcriptional regulator.
 
     0.570
RMCC_4992
Zinc-binding alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
 
  0.545
pks5-2
Polyketide synthase pks5.
  
 0.515
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.