STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0891Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. (477 aa)    
Predicted Functional Partners:
RMCC_1151
Nitrogen fixation-like protein.
   
 
 0.848
RMCC_3295
Sphingosine/diacylglycerol kinase-like enzyme.
  
 0.716
serB2
Phosphoserine phosphatase serB2.
    
 0.686
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.669
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 0.651
RMCC_4375
Cystathionine beta-synthase CBS.
    
  0.649
RMCC_3967
1-acyl-sn-glycerol-3-phosphate acyltransferase; Bifunctionnal transmembrane phospholipid biosynthesis enzyme plsC: L-3-phosphoserine phosphatase + 1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.645
RMCC_5491
Endonuclease/exonuclease/phosphatase.
 
 
  0.607
RMCC_4747
Aminopeptidase Y.
    
  0.586
RMCC_4748
Lipoprotein aminopeptidase lpqL.
    
  0.586
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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