STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0929Transmembrane transport protein MmpL1. (490 aa)    
Predicted Functional Partners:
RMCC_4083
Transport protein.
 
    
0.918
RMCC_0509
Transmembrane transport protein MmpL1.
 
    
0.857
mmpS5-2
Transmembrane proteinm, MmpS5.
  
  
 0.780
RMCC_0511
Transport protein.
 
    
0.777
RMCC_3096
Deazaflavin-dependent nitroreductase family protein.
  
     0.554
RMCC_3996
Conserved proline rich membrane protein.
  
     0.529
RMCC_3881
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
  
     0.522
RMCC_0926
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
       0.508
RMCC_0927
TetR family transcriptional regulator.
       0.508
RMCC_5149
ATP synthase I.
  
     0.496
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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