STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0943Sorbitol phosphotransferase protein II domain-containing protein. (125 aa)    
Predicted Functional Partners:
RMCC_0944
PTS system glucitol/sorbitol-specific IIA compon ent.
 
 
 0.996
gutA
Glucitol/sorbitol-specific PTS system component IIC.
 
 
 0.993
RMCC_0942
PTS system protein.
     0.992
RMCC_0945
SAF domain protein.
 
    0.933
RMCC_0939
Uncharacterized protein.
 
     0.862
RMCC_6211
PTS system mannitol-specific transporter subunit IIC.
 
  
  0.823
RMCC_0950
Phosphocarrier protein HPr.
    
  0.756
RMCC_0940
Glucitol operon activator.
  
  
 0.748
RMCC_0946
Pyruvate dehydrogenase.
 
    0.694
RMCC_0947
Pyruvate dehydrogenase E1 component beta subunit.
 
     0.659
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.